Transcript: SMIM15-AS1:27

Basic information

LNCipedia transcript ID: SMIM15-AS1:27 
LNCipedia gene ID: SMIM15-AS1
Location (hg19): chr5:60458334-60460554
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2221 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT101658
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.1624 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM15-AS1:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDUFAF2-2:3
4.0 lnc-NDUFAF2-2:3
4.1 lnc-NDUFAF2-2:3
5.0 lnc-NDUFAF2-2:3
5.1 SMIM15-AS1:11
5.2 SMIM15-AS1:27