Transcript: SMIM15-AS1:29

Basic information

LNCipedia transcript ID: SMIM15-AS1:29 
LNCipedia gene ID: SMIM15-AS1
Location (hg19): chr5:60458369-60459329
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 961 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251279.1|HBMT00001138654.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -123.7049 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM15-AS1:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NDUFAF2-2:13
5.0 lnc-NDUFAF2-2:13
5.1 SMIM15-AS1:13
5.2 SMIM15-AS1:29