Transcript: SNHG10:7

Basic information

LNCipedia transcript ID: SNHG10:7 
LNCipedia gene ID: SNHG10
Location (hg19): chr14:95997690-96001086
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2766 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA421:1
Alternative gene names: FLJ40557; NCRNA00063; LINC00063


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -13.0589 non-coding 
CPAT coding probability 4.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SNHG10:7 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 SNHG10:7
4.1 SNHG10:7
5.0 SNHG10:7
5.1 SNHG10:7
5.2 SNHG10:7