Transcript: SNHG21:11

Basic information

LNCipedia transcript ID: SNHG21:11 
LNCipedia gene ID: SNHG21
Location (hg19): chr15:83419324-83425831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6246 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000544685; NONHSAT047861
Alternative gene names: ENSG00000250988; AC105339.1; SCARNA15HG; FSD2-AS1; RP11-752G15.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -28.4144 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SNHG21:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WHAMM-2:1
3.1 lnc-WHAMM-2:4
4.0 SNHG21:11
4.1 SNHG21:11
5.0 SNHG21:11
5.1 SNHG21:11
5.2 SNHG21:11