Transcript: SNHG21:16

Basic information

LNCipedia transcript ID: SNHG21:16 
LNCipedia gene ID: SNHG21
Location (hg19): chr15:83419351-83424082
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 818 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023488; NONHSAT047865
Alternative gene names: XLOC_011333; linc-WHAMM-1; SCARNA15HG; FSD2-AS1; RP11-752G15.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -118.9862 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SNHG21:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WHAMM-2:2
3.1 lnc-WHAMM-2:7
4.0 SNHG21:16
4.1 SNHG21:16
5.0 SNHG21:16
5.1 SNHG21:16
5.2 SNHG21:16