Transcript: SNHG7:13

Basic information

LNCipedia transcript ID: SNHG7:13 
LNCipedia gene ID: SNHG7
Location (hg19): chr9:139619686-139622636
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2157 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233016.2|ENST00000447221.1
Alternative gene names: MGC16037; NCRNA00061


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.5295 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SNHG7:13 no no no no

Available literature

  1. She (2016), lncRNA-SNHG7 promotes the proliferation, migration and invasion and inhibits apoptosis of lung cancer cells by enhancing the FAIM2 expression., Oncol. Rep.
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SNHG7:13
5.0 SNHG7:13
5.1 SNHG7:13
5.2 SNHG7:13