Transcript: SNRK-AS1:4

Basic information

LNCipedia transcript ID: SNRK-AS1:4 
LNCipedia gene ID: SNRK-AS1
Location (hg19): chr3:43388846-43392847
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 978 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT089288
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1052.9938 coding 
CPAT coding probability 87.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SNRK-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANO10-1:4
4.0 SNRK-AS1:4
4.1 SNRK-AS1:4
5.0 SNRK-AS1:4
5.1 SNRK-AS1:4
5.2 SNRK-AS1:4