Transcript: SPAG5-AS1:12

Basic information

LNCipedia transcript ID: SPAG5-AS1:12 
LNCipedia gene ID: SPAG5-AS1
Location (hg19): chr17:26926188-26933928
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 834 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227543.3|ENST00000556050.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.0043 non-coding 
CPAT coding probability 1.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SPAG5-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SPAG5-AS1:12
5.0 SPAG5-AS1:12
5.1 SPAG5-AS1:12
5.2 SPAG5-AS1:12