Transcript: SRP14-AS1:3

Basic information

LNCipedia transcript ID: SRP14-AS1:3 
LNCipedia gene ID: SRP14-AS1
Location (hg19): chr15:40331497-40357820
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 800 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023366; NONHSAT041791
Alternative gene names: XLOC_011219; linc-BUB1B;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.8817 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SRP14-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-EIF2AK4-2:2
3.1 lnc-EIF2AK4-2:2
4.0 SRP14-AS1:3
4.1 SRP14-AS1:3
5.0 SRP14-AS1:3
5.1 SRP14-AS1:3
5.2 SRP14-AS1:3