Transcript: ST3GAL5-AS1:10

Basic information

LNCipedia transcript ID: ST3GAL5-AS1:10 
LNCipedia gene ID: ST3GAL5-AS1
RefSeq ID: NR_110569
Location (hg19): chr2:86116403-86119375
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1116 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110569; NR_110569.1
Alternative gene names: ; ST3GAL5-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.6338 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ST3GAL5-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATOH8-2:17
4.0 ST3GAL5-AS1:10
4.1 ST3GAL5-AS1:10
5.0 ST3GAL5-AS1:10
5.1 ST3GAL5-AS1:10
5.2 ST3GAL5-AS1:10