Transcript: ST3GAL5-AS1:14

Basic information

LNCipedia transcript ID: ST3GAL5-AS1:14 
LNCipedia gene ID: ST3GAL5-AS1
Location (hg19): chr2:86118038-86118990
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 468 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000524693; ENST00000524693.1; AC105053.4-004; OTTHUMT00000388865.1; NONHSAT072071
Alternative gene names: ENSG00000232504; AC105053.4; ENSG00000232504.3; OTTHUMG00000153169.4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -143.6833 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ST3GAL5-AS1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ATOH8-1:9
3.1 lnc-ATOH8-2:9
4.0 ST3GAL5-AS1:14
4.1 ST3GAL5-AS1:14
5.0 ST3GAL5-AS1:14
5.1 ST3GAL5-AS1:14
5.2 ST3GAL5-AS1:14