Transcript: ST7-AS1:3

Basic information

LNCipedia transcript ID: ST7-AS1:3 
LNCipedia gene ID: ST7-AS1
Location (hg19): chr7:116592671-116593291
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 621 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT122915
Alternative gene names: ST7AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -259.6135 non-coding 
CPAT coding probability 0.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ST7-AS1:3 no no no no

Available literature

  1. Vincent (2002), The RAY1/ST7 tumor-suppressor locus on chromosome 7q31 represents a complex multi-transcript system., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC106873.4.1-1:3
4.0 ST7-AS1:3
4.1 ST7-AS1:3
5.0 ST7-AS1:3
5.1 ST7-AS1:3
5.2 ST7-AS1:3