Transcript: STARD13-AS:53

Basic information

LNCipedia transcript ID: STARD13-AS:53 
HGNC Gene Symbol: STARD13-AS    
HGNC Full Gene Name: STARD13 antisense RNA
Ensembl Gene ID: ENSG00000236581
Ensembl Transcript ID: ENST00000592544
Location (hg19): chr13:33851690-33855471
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 574 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT033140; ENST00000592544.1; ENST00000592544.5
Alternative gene names: ENSG00000236581.4; STARD13-AS; ENSG00000236581.8;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -326.1546 non-coding 
CPAT coding probability 4.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STARD13-AS:53 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KL-2:49
4.0 STARD13-AS:53
4.1 STARD13-AS:53
5.0 STARD13-AS:53
5.1 STARD13-AS:53
5.2 STARD13-AS:53