Transcript: STK24-AS1:1

Basic information

LNCipedia transcript ID: STK24-AS1:1 
HGNC Gene Symbol: STK24-AS1    
HGNC Full Gene Name: STK24 antisense RNA 1
Ensembl Gene ID: ENSG00000224418
Ensembl Transcript ID: ENST00000434547
Location (hg19): chr13:99229498-99231084
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1278 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00021587; ENST00000434547.1; STK24-AS1-001; OTTHUMT00000045547.1
Alternative gene names: XLOC_010477; linc-UBAC2-2; ENSG00000224418.1; STK24-AS1; OTTHUMG00000017249.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.4074 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STK24-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FARP1-1:1
3.1 lnc-FARP1-1:1
4.0 STK24-AS1:1
4.1 STK24-AS1:1
5.0 STK24-AS1:1
5.1 STK24-AS1:1
5.2 STK24-AS1:1