Transcript: STK32A-AS1:18

Basic information

LNCipedia transcript ID: STK32A-AS1:18 
LNCipedia gene ID: STK32A-AS1
Location (hg19): chr5:146576307-146581981
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 534 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT104421; FPKM1_group_26509_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.2688 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STK32A-AS1:18 no no no no

Available literature

  1. Wang (2017), Long non-coding RNA CTA sensitizes osteosarcoma cells to doxorubicin through inhibition of autophagy., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PPP2R2B-2:3
4.0 lnc-PPP2R2B-2:3
4.1 lnc-PPP2R2B-2:3
5.0 lnc-PPP2R2B-2:3
5.1 STK32A-AS1:9
5.2 STK32A-AS1:18