Transcript: STX17-AS1:3

Basic information

LNCipedia transcript ID: STX17-AS1:3 
HGNC Gene Symbol: STX17-AS1    
HGNC Full Gene Name: STX17 antisense RNA 1
Ensembl Gene ID: ENSG00000255145
Ensembl Transcript ID: ENST00000529965
Location (hg19): chr9:102648604-102668883
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 548 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000529965.2
Alternative gene names: ENSG00000255145.2; STX17-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.0881 non-coding 
CPAT coding probability 1.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
STX17-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 STX17-AS1:3
4.1 STX17-AS1:3
5.0 STX17-AS1:3
5.1 STX17-AS1:3
5.2 STX17-AS1:3