Transcript: SUCLG2-AS1:4

Basic information

LNCipedia transcript ID: SUCLG2-AS1:4 
HGNC Gene Symbol: SUCLG2-AS1    
HGNC Full Gene Name: SUCLG2 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000241316
Ensembl Transcript ID: ENST00000482677
Location (hg19): chr3:67705182-67998137
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2226 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000482677; ENST00000482677.1; RP11-81N13.1-001; OTTHUMT00000351990.1; NONHSAT090321; ENST00000482677.5
Alternative gene names: ENSG00000241316; RP11-81N13.1; ENSG00000241316.2; OTTHUMG00000158739.2; ENSG00000241316.6; SUCLG2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.6749 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SUCLG2-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM19A1-1:2
3.1 lnc-FAM19A1-1:2
4.0 SUCLG2-AS1:4
4.1 SUCLG2-AS1:4
5.0 SUCLG2-AS1:4
5.1 SUCLG2-AS1:4
5.2 SUCLG2-AS1:4