Transcript: TAB2-AS1:6

Basic information

LNCipedia transcript ID: TAB2-AS1:6 
HGNC Gene Symbol: TAB2-AS1    
HGNC Full Gene Name: TAB2 antisense RNA 1
Ensembl Gene ID: ENSG00000225924
Ensembl Transcript ID: ENST00000637865
Location (hg19): chr6:149568457-149578679
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 794 bp
Exons: 3
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637865.1
Alternative gene names: ENSG00000225924.2; RP1-111D6.4; TAB2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -86.4201 non-coding 
CPAT coding probability 12.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TAB2-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZC3H12D-1:3
5.0 lnc-ZC3H12D-1:3
5.1 TAB2-AS1:3
5.2 TAB2-AS1:6