Transcript: TBC1D8-AS1:7

Basic information

LNCipedia transcript ID: TBC1D8-AS1:7 
LNCipedia gene ID: TBC1D8-AS1
Location (hg19): chr2:101768048-101772328
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3052 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272902.1|MICT00000195371.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -6.9743 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBC1D8-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C2orf29-1:3
5.0 lnc-C2orf29-1:3
5.1 TBC1D8-AS1:2
5.2 TBC1D8-AS1:7