Transcript: TBX18-AS1:5

Basic information

LNCipedia transcript ID: TBX18-AS1:5 
LNCipedia gene ID: TBX18-AS1
Location (hg19): chr6:85399172-85419269
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 591 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT113819
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -339.1024 non-coding 
CPAT coding probability 4.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX18-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRAP2-3:5
4.0 TBX18-AS1:5
4.1 TBX18-AS1:5
5.0 TBX18-AS1:5
5.1 TBX18-AS1:5
5.2 TBX18-AS1:5