Transcript: TBX18-AS1:7

Basic information

LNCipedia transcript ID: TBX18-AS1:7 
LNCipedia gene ID: TBX18-AS1
RefSeq ID: NR_125875
Location (hg19): chr6:85399176-85419252
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 604 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125875; NR_125875.1
Alternative gene names: ; TBX18-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -237.7066 non-coding 
CPAT coding probability 4.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX18-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRAP2-3:13
4.0 TBX18-AS1:7
4.1 TBX18-AS1:7
5.0 TBX18-AS1:7
5.1 TBX18-AS1:7
5.2 TBX18-AS1:7