Transcript: TBX2-AS1:32

Basic information

LNCipedia transcript ID: TBX2-AS1:32 
LNCipedia gene ID: TBX2-AS1
RefSeq ID: NR_136397
Location (hg19): chr17:59439029-59445065
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 442 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136397.1
Alternative gene names: LOC101927855


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -286.2916 non-coding 
CPAT coding probability 4.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TBX2-AS1:32 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 TBX2-AS1:32
5.1 TBX2-AS1:32
5.2 TBX2-AS1:32