Transcript: TET2-AS1:3

Basic information

LNCipedia transcript ID: TET2-AS1:3 
LNCipedia gene ID: TET2-AS1
Location (hg19): chr4:106267395-106274105
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6711 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251586.1|HBMT00001088556.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.4501 non-coding 
CPAT coding probability 5.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TET2-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TET2-AS1:3
5.0 TET2-AS1:3
5.1 TET2-AS1:3
5.2 TET2-AS1:3