Transcript: TET2-AS1:5

Basic information

LNCipedia transcript ID: TET2-AS1:5 
LNCipedia gene ID: TET2-AS1
Location (hg19): chr4:106089354-106274105
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3943 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251586.1|MICT00000269066.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.7962 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TET2-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TET2-AS1:5
5.0 TET2-AS1:5
5.1 TET2-AS1:5
5.2 TET2-AS1:5