Transcript: TEX26-AS1:20

Basic information

LNCipedia transcript ID: TEX26-AS1:20 
LNCipedia gene ID: TEX26-AS1
Location (hg19): chr13:31504814-31505619
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 435 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000451495.1; RP11-252M21.3-001; OTTHUMT00000044377.1
Alternative gene names: ENSG00000224743.1; RP11-252M21.3; OTTHUMG00000016680.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -288.9668 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX26-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSPH1-5:1
4.0 TEX26-AS1:20
4.1 TEX26-AS1:20
5.0 TEX26-AS1:20
5.1 TEX26-AS1:20
5.2 TEX26-AS1:20