Transcript: TEX26-AS1:5

Basic information

LNCipedia transcript ID: TEX26-AS1:5 
LNCipedia gene ID: TEX26-AS1
RefSeq ID: NR_038287
Location (hg19): chr13:31456972-31506745
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2061 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT032814; NR_038287; NR_038287.1
Alternative gene names: ; TEX26-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.1367 non-coding 
CPAT coding probability 11.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TEX26-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSPH1-5:7
4.0 TEX26-AS1:5
4.1 TEX26-AS1:5
5.0 TEX26-AS1:5
5.1 TEX26-AS1:5
5.2 TEX26-AS1:5