Transcript: TGFB2-AS1:3

Basic information

LNCipedia transcript ID: TGFB2-AS1:3 
LNCipedia gene ID: TGFB2-AS1
Location (hg19): chr1:218517568-218519236
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 529 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232480.1|HBMT00000086075.1
Alternative gene names: NR_046268


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -411.2849 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TGFB2-AS1:3 no no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TGFB2-AS1:3
5.0 TGFB2-AS1:3
5.1 TGFB2-AS1:3
5.2 TGFB2-AS1:3