Transcript: THSD4-AS1:8

Basic information

LNCipedia transcript ID: THSD4-AS1:8 
LNCipedia gene ID: THSD4-AS1
Location (hg19): chr15:71479319-71481364
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 823 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000562634.1; RP11-673C5.2-004; OTTHUMT00000420818.1
Alternative gene names: ENSG00000259964.1; RP11-673C5.2; OTTHUMG00000172838.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.5144 non-coding 
CPAT coding probability 22.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
THSD4-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CT62-1:3
4.0 THSD4-AS1:8
4.1 THSD4-AS1:8
5.0 THSD4-AS1:8
5.1 THSD4-AS1:8
5.2 THSD4-AS1:8