Transcript: TMCC1-AS1:1

Basic information

LNCipedia transcript ID: TMCC1-AS1:1 
LNCipedia gene ID: TMCC1-AS1
RefSeq ID: NR_037893
Location (hg19): chr3:129612714-129627755
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3497 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT092080; NR_037893; NR_037893.1
Alternative gene names: ; TMCC1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.1048 non-coding 
CPAT coding probability 7.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMCC1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRH-6:1
4.0 TMCC1-AS1:1
4.1 TMCC1-AS1:1
5.0 TMCC1-AS1:1
5.1 TMCC1-AS1:1
5.2 TMCC1-AS1:1