Transcript: TMEM132D-AS1:26

Basic information

LNCipedia transcript ID: TMEM132D-AS1:26 
HGNC Gene Symbol: TMEM132D-AS1    
HGNC Full Gene Name: TMEM132D antisense RNA 1
Ensembl Gene ID: ENSG00000249196
Ensembl Transcript ID: ENST00000541320
Location (hg19): chr12:129594240-129597839
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 440 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000541320; ENST00000541320.1; RP11-669N7.2-004; OTTHUMT00000399595.1; ENST00000541320.5
Alternative gene names: ENSG00000249196; RP11-669N7.2; ENSG00000249196.2; OTTHUMG00000168401.1; ENSG00000249196.6; TMEM132D-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.0373 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM132D-AS1:26 yes no no no

Available literature

  1. Miao (2017), The Effect of Botulinum Toxin Type A on Expression Profiling of Long Noncoding RNAs in Human Dermal Fibroblasts., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GLT1D1-1:5
3.1 lnc-GLT1D1-1:6
4.0 lnc-GLT1D1-1:6
4.1 lnc-GLT1D1-1:6
5.0 lnc-GLT1D1-1:6
5.1 TMEM132D-AS1:10
5.2 TMEM132D-AS1:26