Transcript: TMEM44-AS1:6

Basic information

LNCipedia transcript ID: TMEM44-AS1:6 
LNCipedia gene ID: TMEM44-AS1
RefSeq ID: NR_047573
Location (hg19): chr3:194304997-194311561
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1434 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT094103; NR_047573; NR_047573.1
Alternative gene names: ; TMEM44-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.258 non-coding 
CPAT coding probability 1.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM44-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM43A-4:7
4.0 TMEM44-AS1:6
4.1 TMEM44-AS1:6
5.0 TMEM44-AS1:6
5.1 TMEM44-AS1:6
5.2 TMEM44-AS1:6