Transcript: TMEM51-AS1:4

Basic information

LNCipedia transcript ID: TMEM51-AS1:4 
HGNC Gene Symbol: TMEM51-AS1    
HGNC Full Gene Name: TMEM51 antisense RNA 1
Ensembl Gene ID: ENSG00000175147
Ensembl Transcript ID: ENST00000404665
Location (hg19): chr1:15442448-15478898
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2780 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000404665; ENST00000404665.2; C1orf126-002; OTTHUMT00000092380.2; ENST00000404665.3
Alternative gene names: ENSG00000175147; C1orf126; ENSG00000175147.7; OTTHUMG00000002043.4; TMEM51-AS1; ENSG00000175147.11; FLJ23703


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.478 non-coding 
CPAT coding probability 14.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM51-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C1orf195-1:2
3.1 lnc-C1orf195-1:2
4.0 TMEM51-AS1:4
4.1 TMEM51-AS1:4
5.0 TMEM51-AS1:4
5.1 TMEM51-AS1:4
5.2 TMEM51-AS1:4