Transcript: TMEM72-AS1:16

Basic information

LNCipedia transcript ID: TMEM72-AS1:16 
LNCipedia gene ID: TMEM72-AS1
Location (hg19): chr10:45454365-45454974
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 610 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273363.1|ENST00000609898.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -291.5293 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMEM72-AS1:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TMEM72-AS1:16
5.0 TMEM72-AS1:16
5.1 TMEM72-AS1:16
5.2 TMEM72-AS1:16