Transcript: TMPO-AS1:11

Basic information

LNCipedia transcript ID: TMPO-AS1:11 
LNCipedia gene ID: TMPO-AS1
Location (hg19): chr12:98906149-98909948
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3800 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000257167.2|FTMT24600005211.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.4092 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TMPO-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TMPO-AS1:11
5.0 TMPO-AS1:11
5.1 TMPO-AS1:11
5.2 TMPO-AS1:11