Transcript: TNK2-AS1:1

Basic information

LNCipedia transcript ID: TNK2-AS1:1 
HGNC Gene Symbol: TNK2-AS1    
HGNC Full Gene Name: TNK2 antisense RNA 1
Ensembl Gene ID: ENSG00000224614
Ensembl Transcript ID: ENST00000458180
Location (hg19): chr3:195634947-195638128
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2096 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458180; ENST00000458180.1; AC124944.2-001; OTTHUMT00000341447.1; NONHSAT094263
Alternative gene names: ENSG00000224614; AC124944.2; ENSG00000224614.1; OTTHUMG00000155738.1; TNK2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.895 non-coding 
CPAT coding probability 6.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TNK2-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MUC20-2:1
3.1 lnc-MUC20-3:1
4.0 TNK2-AS1:1
4.1 TNK2-AS1:1
5.0 TNK2-AS1:1
5.1 TNK2-AS1:1
5.2 TNK2-AS1:1