Transcript: TNKS2-AS1:13

Basic information

LNCipedia transcript ID: TNKS2-AS1:13 
LNCipedia gene ID: TNKS2-AS1
Location (hg19): chr10:93556834-93558013
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1180 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228701.1|ENCT00000058518.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.4495 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TNKS2-AS1:13 no no no no

Available literature

  1. Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TNKS2-AS1:13
5.0 TNKS2-AS1:13
5.1 TNKS2-AS1:13
5.2 TNKS2-AS1:13