Transcript: TNRC6C-AS1:4

Basic information

LNCipedia transcript ID: TNRC6C-AS1:4 
LNCipedia gene ID: TNRC6C-AS1
Location (hg19): chr17:76103480-76106416
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2937 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000374976.2
Alternative gene names: ENSG00000204282.3; TNRC6C-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.1397 non-coding 
CPAT coding probability 16.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TNRC6C-AS1:4 yes no no no

Available literature

  1. Hou (2018), LncRNA TNRC6C-AS1 regulates UNC5B in thyroid cancer to influence cell proliferation, migration, and invasion as a competing endogenous RNA of miR-129-5p., J. Cell. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC021593.1-1:3
4.0 TNRC6C-AS1:4
4.1 TNRC6C-AS1:4
5.0 TNRC6C-AS1:4
5.1 TNRC6C-AS1:4
5.2 TNRC6C-AS1:4