Transcript: TRHDE-AS1:21

Basic information

LNCipedia transcript ID: TRHDE-AS1:21 
LNCipedia gene ID: TRHDE-AS1
Location (hg19): chr12:72642091-72666462
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 11748 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236333.3|MICT00000082242.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.2273 non-coding 
CPAT coding probability 13.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TRHDE-AS1:21 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 TRHDE-AS1:21
5.0 TRHDE-AS1:21
5.1 TRHDE-AS1:21
5.2 TRHDE-AS1:21