Transcript: TTC21B-AS1:5

Basic information

LNCipedia transcript ID: TTC21B-AS1:5 
LNCipedia gene ID: TTC21B-AS1
RefSeq ID: NR_038983
Location (hg19): chr2:166790367-166804831
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 746 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT075266; NR_038983; NR_038983.1
Alternative gene names: ; TTC21B-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.0787 non-coding 
CPAT coding probability 7.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTC21B-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CSRNP3-4:5
4.0 TTC21B-AS1:5
4.1 TTC21B-AS1:5
5.0 TTC21B-AS1:5
5.1 TTC21B-AS1:5
5.2 TTC21B-AS1:5