Transcript: TTLL11-IT1:2

Basic information

LNCipedia transcript ID: TTLL11-IT1:2 
LNCipedia gene ID: TTLL11-IT1
Location (hg19): chr9:124650464-124650844
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 381 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr9_6547_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.0028 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTLL11-IT1:2 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDUFA8-1:2
4.0 TTLL11-IT1:2
4.1 TTLL11-IT1:2
5.0 TTLL11-IT1:2
5.1 TTLL11-IT1:2
5.2 TTLL11-IT1:2