Transcript: TTTY1B:1

Basic information

LNCipedia transcript ID: TTTY1B:1 
LNCipedia gene ID: TTTY1B
RefSeq ID: NR_003589
Location (hg19): chrY:6258442-6279605
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 940 bp
Exons: 5
Sources: Broad Institute; NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00017569; NONHSAT139337; NR_003589; NR_003589.1
Alternative gene names: XLOC_008279; linc-TBL1Y-3; ; TTTY1B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.7012 non-coding 
CPAT coding probability 1.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY1B:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPY2-1:1
3.1 lnc-TSPY2-1:1
4.0 TTTY1B:1
4.1 TTTY1B:1
5.0 TTTY1B:1
5.1 TTTY1B:1
5.2 TTTY1B:1