Transcript: TTTY1B:2

Basic information

LNCipedia transcript ID: TTTY1B:2 
HGNC Gene Symbol: TTTY1B    
HGNC Full Gene Name: testis-specific transcript, Y-linked 1B
Ensembl Gene ID: ENSG00000129816
Ensembl Transcript ID: ENST00000250776
Location (hg19): chrY:6258472-6279605
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 910 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000250776; ENST00000250776.5; TTTY1B-001; OTTHUMT00000098355.1; NR_001538
Alternative gene names: ENSG00000129816; TTTY1B; ENSG00000129816.5; OTTHUMG00000040984.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 35.7012 non-coding 
CPAT coding probability 31.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY1B:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPY2-1:2
3.1 lnc-TSPY2-1:2
4.0 TTTY1B:2
4.1 TTTY1B:2
5.0 TTTY1B:2
5.1 TTTY1B:2
5.2 TTTY1B:2