Transcript: TTTY21B:4

Basic information

LNCipedia transcript ID: TTTY21B:4 
LNCipedia gene ID: TTTY21B
Location (hg19): chrY:6311475-6315116
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 305 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00017570
Alternative gene names: XLOC_008280; linc-TBL1Y-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0188 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY21B:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPY2-2:1
3.1 lnc-TSPY2-2:2
4.0 lnc-TSPY2-2:2
4.1 lnc-TSPY2-2:2
5.0 lnc-TSPY2-2:2
5.1 TTTY21B:2
5.2 TTTY21B:4