Transcript: TTTY4:2

Basic information

LNCipedia transcript ID: TTTY4:2 
HGNC Gene Symbol: TTTY4    
HGNC Full Gene Name: testis-specific transcript, Y-linked 4
Ensembl Gene ID: ENSG00000226906
Ensembl Transcript ID: ENST00000436568
Location (hg19): chrY:25082602-25119431
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1346 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000436568; ENST00000436568.1; TTTY4-001; OTTHUMT00000105049.1; NONHSAT139696; NR_001525; NR_002178; NR_002177
Alternative gene names: ENSG00000226906; TTTY4; ENSG00000226906.1; OTTHUMG00000045294.1; TTY4; TTTY4A; LINC00123


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.8624 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BPY2-1:2
3.1 lnc-BPY2-1:1
4.0 TTTY4:2
4.1 TTTY4:2
5.0 TTTY4:2
5.1 TTTY4:2
5.2 TTTY4:2