Transcript: TTTY6B:2

Basic information

LNCipedia transcript ID: TTTY6B:2 
HGNC Gene Symbol: TTTY6B    
HGNC Full Gene Name: testis-specific transcript, Y-linked 6B
Ensembl Gene ID: ENSG00000131548
Ensembl Transcript ID: ENST00000253848
Location (hg19): chrY:24291113-24292978
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 491 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000253848.3; TTTY6B-001; OTTHUMT00000101920.1
Alternative gene names: ENSG00000131548.6; TTTY6B; OTTHUMG00000043580.1; ENSG00000131548.7; LINC00128


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2201 non-coding 
CPAT coding probability 2.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY6B:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBMY1J-2:1
4.0 TTTY6B:2
4.1 TTTY6B:2
5.0 TTTY6B:2
5.1 TTTY6B:2
5.2 TTTY6B:2