Transcript: TTTY7:4

Basic information

LNCipedia transcript ID: TTTY7:4 
LNCipedia gene ID: TTTY7
Location (hg19): chrY:6321719-6325945
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 934 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017596; NONHSAT139343
Alternative gene names: XLOC_008281; linc-TBL1Y-1; LINC00129; TTTY7A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8541 non-coding 
CPAT coding probability 3.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY7:4 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSPY2-3:4
3.1 lnc-TSPY2-3:4
4.0 TTTY7:4
4.1 TTTY7:4
5.0 TTTY7:4
5.1 TTTY7:4
5.2 TTTY7:4