Transcript: TTTY8B:3

Basic information

LNCipedia transcript ID: TTTY8B:3 
HGNC Gene Symbol: TTTY8B    
HGNC Full Gene Name: testis-specific transcript, Y-linked 8B
Ensembl Gene ID: ENSG00000185700
Ensembl Transcript ID: ENST00000328819
RefSeq ID: NR_003591
Location (hg19): chrY:6339072-6341671
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 531 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000328819; ENST00000328819.4; TTTY8B-001; OTTHUMT00000098352.1; NONHSAT139345; NR_003591; NR_001533; NR_003591.1
Alternative gene names: ENSG00000185700; TTTY8B; ENSG00000185700.6; OTTHUMG00000040982.1; ENSG00000185700.10; NCRNA00217


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.1387 non-coding 
CPAT coding probability 8.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
TTTY8B:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AMELY-1:3
3.1 lnc-AMELY-1:1
4.0 TTTY8B:3
4.1 TTTY8B:3
5.0 TTTY8B:3
5.1 TTTY8B:3
5.2 TTTY8B:3