Transcript: UBA6-AS1:17

Basic information

LNCipedia transcript ID: UBA6-AS1:17 
LNCipedia gene ID: UBA6-AS1
RefSeq ID: NR_046116
Location (hg19): chr4:68919226-68938951
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2787 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT096719; NR_046116; NR_046116.1
Alternative gene names: LOC550112; LOC550113


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.1041 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
UBA6-AS1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMPRSS11E-1:17
4.0 UBA6-AS1:17
4.1 UBA6-AS1:17
5.0 UBA6-AS1:17
5.1 UBA6-AS1:17
5.2 UBA6-AS1:17