Transcript: UGDH-AS1:11

Basic information

LNCipedia transcript ID: UGDH-AS1:11 
LNCipedia gene ID: UGDH-AS1
Location (hg19): chr4:39529636-39596327
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2790 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249348.1|ENST00000504032.1
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.4182 non-coding 
CPAT coding probability 99.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
UGDH-AS1:11 no no no no

Available literature

  1. Qu (2018), Comprehensive evaluation of differential lncRNA and gene expression in patients with intervertebral disc degeneration., Mol Med Rep
  2. Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 UGDH-AS1:11
5.0 UGDH-AS1:11
5.1 UGDH-AS1:11
5.2 UGDH-AS1:11