Transcript: USP46-AS1:3

Basic information

LNCipedia transcript ID: USP46-AS1:3 
LNCipedia gene ID: USP46-AS1
RefSeq ID: NR_125363
Location (hg19): chr4:53525573-53527665
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 878 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125363; NR_125363.1
Alternative gene names: ; USP46-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -64.3731 non-coding 
CPAT coding probability 6.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
USP46-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASL11B-5:4
4.0 USP46-AS1:3
4.1 USP46-AS1:3
5.0 USP46-AS1:3
5.1 USP46-AS1:3
5.2 USP46-AS1:3